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Bioinformatician (with R / Python)
  • Warsaw
Bioinformatician (with R / Python)
Warszawa, Warsaw, Masovian Voivodeship, Polska
SQUARE ONE RESOURCES sp. z o.o.
26. 1. 2025
Informacje o stanowisku

technologies-expected :


  • R
  • Python
  • Bash
  • Linux
  • Git
  • Docker
  • PostgreSQL
  • Jenkins

technologies-optional :


  • AWS
  • Apache Spark

responsibilities :


  • Scientific pipeline development
  • technologies used: R/Python + nextflow + docker / singularity, HPC
  • Various scenarios: either designing the algorithm from scratch (in tight collaboration with stakeholders) or taking stakeholders algorithm and productionalizing it (i.e. turning it from a rough script/draft to a robust, tested, performant pipeline)
  • R/Python package development
  • Code review for other team members
  • Data integration pipelines - i.e. a stakeholder requests a report that would answer a specific set of questions based on data already present
  • Maintaining CI/CD
  • Facilitating meetings (occasionally - cross-team, internal or stakeholder meetings)
  • Gathering and refining requirements from stakeholders and other teams

requirements-expected :


  • 4+ years of professional experience in R or Python development
  • Python / R package development (R is preferable)
  • Good knowledge of: bash, linux
  • Experience with git and git workflows
  • Test Driven Development, good coding practices
  • CI/CD tools (gitlab CI/CD, Jenkins)
  • Containerization (docker)
  • Relational databases (PostgreSQL)
  • Experience in collaborative coding (working concurrently with other team members on the same codebase, code review & feedback system)
  • Communication skills

  • Praca Warszawa
  • Warszawa - Oferty pracy w okolicznych lokalizacjach


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